Zoology
Purpose of Course showclose
Course Information showclose
Welcome to BIO309. Below, please find some general information on the course and its requirements.
Course Designer: Olivia D'Ambrogio
Primary Resources: This course is comprised of a range of different free, online materials. However, the course makes primary use of the following materials:
- EstrellaMountain Community College: Dr. Michael Farabee’s Online Biology Book
- Dr. John Kimball’s Biology Pages
- Universityof Michigan’s Animal Diversity Web
- University of California, Berkeley’s Museum of Paleontology
Requirements for Completion: In order to complete this course, you will need to work through each unit and all of its assigned materials. Pay special attention to Unit 1, as this introductory unit will lay the groundwork for understanding the more advanced, exploratory material presented in the latter units. You will also need to complete:
- The Final Exam
Note that you will only receive an official grade on your Final Exam. However, in order to adequately prepare for this exam, you will need to work through all of the readings, video lectures, and other resources in the course.
In order to “pass” this course, you will need to earn a 70% or higher on the Final Exam. Your score on the exam will be tabulated as soon as you complete it. If you do not pass the exam, you may take it again.
Time Commitment: This course should take you a total of 74.5 hours to complete. Each unit includes a “time advisory” that lists the amount of time you are expected to spend on each subunit. These should help you plan your time accordingly. It may be useful to take a look at these time advisories and to determine how much time you have over the next few weeks to complete each unit, and then to set goals for yourself. For example, Unit 1 should take you 10 hours. Perhaps you can sit down with your calendar and decide to complete subunit 1.1 (a total of 8 hours) over the course of a week: read a third of the introductory readings for subunit 1.1 (about 2 hours) on Monday night; a third of the introductory readings for subunit 1.1 (about 2 hours) on Tuesday; the remainder of the introductory readings for subunit 1.1 (about 2 hours) on Wednesday night; the materials for subunit 1.1.3 (about a total of 2 hours) on Thursday night; etc.
Learning Outcomes showclose
- have a comprehensive knowledge of zoology and its relationship with other fields of biology;
- compare and contrast anatomical and physiological characteristics of vertebrates and invertebrates;
- answer specific questions about zoogeography, geologic time scale, animal evolution, and paleontology;
- define, identify, and describe the different body systems; and
- apply this knowledge for further study in any biological fields that involves animals.
Course Requirements showclose
√ have access to a computer;
√ have continuous broadband Internet access;
√ have the ability/permission to install plug-ins (e.g. Adobe Reader or Flash) and software;
√ have the ability to download and save files and documents to a computer;
√ have the ability to open Microsoft Office files and documents (.doc, .ppt, .xls, etc.);
√ have competency in the English language;
√ have read the Saylor Student Handbook.; and
√ have completed the following courses from “The Core Program” of the Biology discipline: BIO101 through BIO110/PHYS102.
Unit Outline show close
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Unit 1: Introduction to Zoology
What is zoology? How does it fit into the large field of biology? In this unit, we will work to answer these questions. The unit will also review the anatomy of animal cells and how they are unique.
Unit 1 Time Advisory show close
Unit 1 Learning Outcomes show close
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1.1 What Is Zoology?
- Reading: Biology Nation’s “Introduction to Zoology”
Link: Biology-Nation’s “Introduction to Zoology” (HTML)
Instructions: Read Introduction to Zoology (HTML) linked above. This reading will cover the topics outlined in sections 1.1.1 and 1.1.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpages above.See a broken link? Please let us know!
- Reading: Government of Tamil Nadu: Chandran, Rani, and Sekar’s Zoology: “Unit 3: Human Anatomy;” “Unit 4: Genetics;” and “Unit 5: Developmental Biology”
Links: Government of Tamil Nadu: Chandran, Rani, and Sekar’s Zoology: “Unit 3: Human Anatomy;” “Unit 4: Genetics;” and “Unit 5: Developmental Biology”
Instructions: Scroll down to item 22 under “Academic Stream Books,” and click on the English link to download the PDF file. Read Units 3-5 on pages 104-220 in their entirety. You may want to save the PDF file to your desk top for easy access as you will return to this text throughout the course.
Terms of Use: Please respect the copyright and terms of use displayed on the webpages above.See a broken link? Please let us know!
- Reading: Biology Nation’s “Introduction to Zoology”
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1.1.1 A Subdivision of Biology
Note: This topic is covered by the readings beneath subunit 1.1.
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1.1.2 Subdivisions of Zoology
Note: This topic is covered by the reading beneath subunit 1.1.
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1.1.2.1 Morphology/Anatomy

Note: This topic is covered by the reading below subunit 1.1.2.
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1.1.2.2 Taxonomy
Note: This topic is covered in more detail in subunit 2.2.
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1.1.2.3 Physiology
Note: This topic is covered in more detail in Unit 3.
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1.1.2.4 Embryology

Note: This topic is covered by the reading below subunit 1.1.2
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1.1.2.5 Genetics

Note: This topic is covered by the reading below subunit 1.1.2
- 1.1.3 Zoology and Other Fields
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1.1.3.1 Zoogeography
- Reading: University of British Columbia: Dr. Eric Taylor’s “Introduction to Zoogeography”
Link: University of British Columbia: Dr. Eric Taylor’s “Introduction to Zoogeography” (HTML)
Instructions: Read this webpage in its entirety for a general overview of zoogeography. Cross-disciplinary sciences have attracted a lot of attention and support in recent years through a convergence of academic perspectivesthat provide us with a fuller understanding of our interconnected and interdependent world. In this section, we will learn about two prominent cross-disciplinary fields that rely on a zoological analysis of the Earth’s history, beginning with zoogeography and then moving on to paleozoology. In zoogeography, we study patterns of the past, present, and future geographical distribution of animals in nature and the processes that regulate these distributions. In other words, its the scientific analysis of the spatial and termporal patterns of biodiversity.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: University of British Columbia: Dr. Eric Taylor’s “Introduction to Zoogeography”
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1.1.3.2 Paleozoology
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s Online Biology Book: “Paleobiology”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s Online Biology Book: “Paleobiology” (HTML)
Instructions: Read the sections “Paleobiology” and “The Geologic Time Scale.” Paleozoology is the study and analysis of animal remains, often recovered from archaeological and paleontological excavations.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Suite101’s “Paleozeology” Webpage
Link: Suite101’s “Paleozoology” (HTML)
Instructions: If you like, browse through and read some articles about recent research in paleozoology to get a sense of the field. This reading is optional.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s Online Biology Book: “Paleobiology”
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1.2 What Makes Animals Different?
- Reading: National Center for Biotechnology Information’s Bookshelf: Sinauer Associates, Inc.: Geoffrey M. Cooper’s The Cell: A Molecular Approach, 2e: “The Origin and Evolution of Cells”
National Center for Biotechnology Information’s Bookshelf: Sinauer Associates, Inc.: Geoffrey M. Cooper’s The Cell: A Molecular Approach, 2e: “The Origin and Evolution of Cells” (HTML)
Instructions: Read the section “The Development of Multicellular Organisms.” This reading covers the topics outlined in subunits 1.2.1-1.2.3.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Animal Cells”
Link: Dr. John Kimball’s Biology Pages: “Animal Cells” (HTML)
Instructions: Look over this figure of an animal cell to understand its structure and organelles. You may choose to click on the links to each organelle to refresh your memory about their functions (but doing so is optional). When you look at an organism, how do you know whether it is an “animal” and not a fungus or protist or plant? Although this may seem simple, some organisms, like sponges and bryozoans, are not at all easy to classify as animals based on their looks alone. According to scientists, the only way to conclusively determine whether an organism is an animal is to confirm the absence of a cell wall. (Animal cells are enclosed by a flexible cell membrane rather than a cell wall).
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: National Center for Biotechnology Information’s Bookshelf: Sinauer Associates, Inc.: Geoffrey M. Cooper’s The Cell: A Molecular Approach, 2e: “The Origin and Evolution of Cells”
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1.2.1 Unique Characteristics of the Animal Cell
Note: This topic is covered by the reading beneath subunit 1.2
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1.2.2 Anatomy of the Animal Cell

Note: This topic is covered by the reading beneath subunit 1.2
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1.2.3 Cell Differentiation
- Web Media: YouTube: EMSAdministrator’s “The Animal Cell”
Link: YouTube: EMSAdministrator’s “The Animal Cell” (YouTube)
Instructions: Watch the video for a brief overview on the structure and function of parts of an animal cell.
Watching this video should take approximately 5 minutes.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Web Media: YouTube: EMSAdministrator’s “The Animal Cell”
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Unit 1 Assessment
- Assessment: The Saylor Foundation’s “Unit 1 Quiz”
Link: The Saylor Foundation’s “Unit 1 Quiz” (PDF)
Instructions: Download the quiz linked above, and answer each question before checking your answers against The Saylor Foundation’s “Unit 1 Quiz Answer Key.” (PDF)See a broken link? Please let us know!
- Assessment: The Saylor Foundation’s “Unit 1 Quiz”
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Unit 2: Evolution and Taxonomy
In this unit, we will survey the history and evolution of animals on earth, with an eye toward understanding how certain adaptations led to the animal kingdom’s success. We will also learn how animals are classified and work towards a general understanding of biodiversity among animals by learning the major characteristics of representative animal phyla. Evolution refers to the process by which forms of life have changed through time by what is described as descent with modification. Taxonomy is the science of naming and classifying living things. Taxonomy and evolutionare related, because the system of taxonomyis based on evolutionary and genetic differences.
Unit 2 Time Advisory show close
Unit 2 Learning Outcomes show close
- 2.1 A Brief History of Animals
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2.1.1 Geologic Time Scale
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I” (HTML)
Instructions: Read the sections “Organization of the Animal Body,” “Evolution and Classification of Animals,” and “Trends in Animal Evolution.” This reading will also cover the topics outlined in sections 2.1.1.1-2.1.1.4
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I”
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2.1.1.1 Earliest Fauna
Note: This topic is covered by the reading above in subunit 2.1.1.
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2.1.1.2 Paleozoic
- Reading: Scienceviews.com: Jason Hamilton’s “The Paleozoic Era”
Link: Scienceviews.com: Jason Hamilton’s “The Paleozoic Era” (HTML)
Instructions: Read this entire article for information on the beginning of the Paleozoic era, including the topics of planet life and the environment.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Scienceviews.com: Jason Hamilton’s “The Paleozoic Era”
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2.1.1.3 Mesozoic
- Reading: Macroevolution.net: Eugene M. McCarthy’s “The Mesozoic Era”
Link: Macroevolution.net: Eugene M. McCarthy’s “The Mesozoic Era” (HTML)
Instructions: Read this entire article.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Macroevolution.net: Eugene M. McCarthy’s “The Mesozoic Era”
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2.1.1.4 Cenozoic
- Reading: Fossil Museum: “Cenozoic Era Paleobiology”
Link: Fossil Museum: “Cenozoic Era Paleobiology” (HTML)
Instructions: Read this entire webpage for an overview of the Cenozoic period.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Fossil Museum: “Cenozoic Era Paleobiology”
- 2.1.2 Evolution of Specific Characteristics
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2.1.2.1 The Amnion
- Reading: The Tree of Life Web Project’s Michel Laurin and Jacques A. Gauthier’s “Amniota”
Link: The Tree of Life Web Project’s Michel Laurin and Jacques A. Gauthier’s “Amniota” (HTML)
Instructions: Read this page in its entirety, and carefully view the images.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: The Tree of Life Web Project’s Michel Laurin and Jacques A. Gauthier’s “Amniota”
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2.1.2.2 The Skull
- Reading: Wikipedia’s “Skull”
Link: Wikipedia’s “Skull” (HTML)
Also available in: PDF
Instructions: Read the introduction and the sections on “Tetrapod Skulls” and “Skulls in Fish;” also look over the “Gallery” of skull images.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: University of California, Berkeley’s Museum of Paleontology: “Tetrapods”
Link: University of California, Berkeley’s Museum of Paleontology: “Tetrapods” (HTML)
Instructions: Read the entire webpage for information on tetrapods. Pay particular attention to image and text on the tetrapod skull.
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- Reading: Wikipedia’s “Skull”
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2.1.2.3 Eyes
- Reading: The Karger Gazette: Dr. Russell Fernald’s “The Evolution of Eyes”; Dr. John Kimball’s Biology Pages: “The Compound Eye”; and The Living World of Molluscs: Dr. R. Nordsieck’s “The Evolution of the Mollusc Eye”
Links: The Karger Gazette: Dr. Russell Fernald’s “The Evolution of Eyes;” (HTML) Dr. John Kimball’s Biology Pages: “The Compound Eye;” (HTML) and The Living World of Molluscs: Dr. R. Nordsieck’s “The Evolution of the Mollusc Eye” (HTML)
Instructions: Read these pages in their entirety (Dr. Fernald’s article includes seven pages; read from “The Evolution of Eyes” to “Conclusions”) in order to understand the basics of eye evolution and the development of complex eyes in two major invertebrate groups.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Web Media: Gresham College: Professor William Ayliffe’s “The Evolution of Vision”
Link: Gresham College: Professor William Ayliffe’s “The Evolution of Vision” (Vimeo)
Instructions: Watch this video, which is a lecture by Professor William Ayliffe. In the lecture, he discusses theories of the evolution of vision and describes recent research in this exciting area of evolutionary biology.
Watching this video and taking notes should take approximately 2 hours.
Terms of Use:This resource is licensed under a Creative Commons Attribution 3.0 Unported License. It is attributed to William Ayliffe, and the original version can be found here.See a broken link? Please let us know!
- Reading: The Karger Gazette: Dr. Russell Fernald’s “The Evolution of Eyes”; Dr. John Kimball’s Biology Pages: “The Compound Eye”; and The Living World of Molluscs: Dr. R. Nordsieck’s “The Evolution of the Mollusc Eye”
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2.1.2.4 Exoskeleton
- Reading: North Carolina State University: Professor John R. Meyer’s “External Anatomy: The Exoskeleton”
Link: North Carolina State University: Professor John R. Meyer’s “External Anatomy: The Exoskeleton” (HTML)
Instructions: Read the entire article linked above. Make sure to click on the “Go to Page Two” link at the bottom of the page to complete your reading.
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- Reading: North Carolina State University: Professor John R. Meyer’s “External Anatomy: The Exoskeleton”
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2.1.2.5 Skin
- Reading: Wiley Online Library: Anatomical Society of Great Britain and Ireland’s Journal of Anatomy: Matthew K. Vickaryous and Jean-Yves Sire’s “The Integumentary Skeleton of Tretrapods: Origin, Evolution, and Development”
Link: Wiley Online Library: Anatomical Society of Great Britain and Ireland’s Journal of Anatomy: Matthew K. Vickaryous and Jean-Yves Sire’s “The Integumentary Skeleton of Tretrapods: Origin, Evolution, and Development” (HTML)
Instructions: You may read the article directly on the webpage, or click on the “Get PDF” link to download the PDF file (24 pages). Read the entire article for information on the integumentary skeleton of vertebrates.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Wiley Online Library: Anatomical Society of Great Britain and Ireland’s Journal of Anatomy: Matthew K. Vickaryous and Jean-Yves Sire’s “The Integumentary Skeleton of Tretrapods: Origin, Evolution, and Development”
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2.1.2.6 Hair
- Reading: University of Michigan’s Animal Diversity Web: Phil Myers’s “Hair”
Link: University of Michigan’s Animal Diversity Web: Phil Myers’s “Hair” (HTML)
Instructions: Read the entire webpage to learn about the description, function, and evolution of hair.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: University of Michigan’s Animal Diversity Web: Phil Myers’s “Hair”
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2.1.2.7 Feathers
- Reading: Eastern Kentucky University: Professor Gary Ritchison’s Ornithology: “Feather Evolution”
Link: Eastern Kentucky University: Professor Gary Ritchison’s Ornithology: “Feather Evolution” (HTML)
Instructions: Read the entire webpage for an overview of feather evolution.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: Oxford University Press: Integrative and Comparative Biology: Paul F.A. Maderson and Lorenzo Alibardi’s “The Development of the Sauropsid Integument: A Contribution to the Problem of the Origin and Evolution of Feathers”
Link: Oxford University Press: Integrative and Comparative Biology: Paul F.A. Maderson and Lorenzo Alibardi’s “The Development of the Sauropsid Integument: A Contribution to the Problem of the Origin and Evolution of Feathers” (HTML)
Instructions: You may read the article on the webpage, or you may click on “Full Text PDF” to access the PDF file (17 pages). Read the entire article linked above for more detailed and complex information on the evolution of feathers. Take careful notes and re-read as necessary as you review this article.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Eastern Kentucky University: Professor Gary Ritchison’s Ornithology: “Feather Evolution”
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2.2 Taxonomy
- Reading: Bumblebee.org: “Taxonomy”
Link: Bumblebee.org: “Taxonomy” (HTML)
Instructions: You may recall from Unit 6 of the Saylor Foundation’s BIO102 course, Taxonomy is the science which deals with the study of identifying, grouping, and naming organisms according to their established natural relationship. Read the webpage linked above in its entirety for a review on taxonomy.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: Bumblebee.org: “Taxonomy”
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2.2.1 Classification Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Classification” and University of Michigan: Animal Diversity Web’s Tanya Dewey's “Organismal Classification”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Classification” (HTML) and University of Michigan: Animal Diversity Web’s Tanya Dewey's “Organismal Classification” (HTML)
Instructions: In The Online Biology Book, read the whole chapter except for “The Kingdoms of Life.” Read all of the Animal Diversity Web’s “Organismal Classification.” These readings will cover the topics outlined in subunits 2.2.1.1 and 2.2.1.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Colby College: Professor Tim Christensen’s BI131 Laboratory: “Functional Diversity Found in New England Mammal Skulls”
Link: Colby College: Professor Tim Christensen’s BI131 Laboratory: “Functional Diversity Found in New England Mammal Skulls” (PDF)
Instructions: Scroll down the Colby College website to the week of November 30th. Under this date, select the first hyperlink titled “Functional Diversity Found in New England Mammal Skulls” to download the PDF file. Please read the entire lab (5 pages). The dichotomous key is an important feature in taxonomy. It is used to characterize an animal. The link teaches you how to use a dichotomous key.
Terms of use: Please respect the copyright and terms of use displayed on the webpage aboveThe Saylor Foundation does not yet have materials for this portion of the course. If you are interested in contributing your content to fill this gap or aware of a resource that could be used here, please submit it here.
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Classification” and University of Michigan: Animal Diversity Web’s Tanya Dewey's “Organismal Classification”
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2.2.2 Linnean System
- Reading: Palaeos.org: “Linnean Taxonomy”
Link: Palaeos.org: “Linnean Taxonomy” (HTML)
Instructions: Read this brief encyclopedic article for information on the Linnean classification system.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Palaeos.org: “Linnean Taxonomy”
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2.2.3 Modern Adjustments

Note: This topic is covered by the reading in subunit 2.2.1
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2.3 Acoelomates
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2.3.1 Porifera
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I” (HTML)
Instructions: Read the sections “Sponges” and “Tissues: Jellyfish, Corals, and Sea Anemones.” This reading also covers the topics outlined in subunits 2.3.1 and 2.3.2. Acoelomates are characterized by the absence of a body cavity (coelom). Note that phylas Porifera, Cnidaria, and Ctenophora are classified as acoelomates.
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- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I”
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2.3.2 Cnidaria
- Reading: Tree of Life Project: Daphne G. Fautin and Sandra L. Romano’s “Cnidaria”
Link: Tree of Life Project: Daphne G. Fautin and Sandra L. Romano’s “Cnidaria” (HTML)
Instructions: Read the entire webpage, and carefully view the images.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Tree of Life Project: Daphne G. Fautin and Sandra L. Romano’s “Cnidaria”
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2.3.3 Ctenophora
- Reading: University of California Museum of Paleontology: Ben M. Waggoner’s “Introduction to the Ctenophora”
Link: University of California Museum of Paleontology: Ben M. Waggoner’s “Introduction to the Ctenophora” (HTML)
Instructions: Read this section in its entirety.
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- Reading: University of California Museum of Paleontology: Ben M. Waggoner’s “Introduction to the Ctenophora”
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2.4 Not-Quite Coelomates
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2.4.1 Platyhelminthes
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I” (HTML)
Instructions: Read the sections “Bilateral Symmetry and Cephalization: Phylum Platyhelminthes” and “The Tube-within-a-tube Body Plan: Phylum Nematoda.” This reading also covers the topic for subunit 2.4.2. Platyhelminthes and nematodes are sometimes classified by biologists as pseudocoelomates. Pseudocoelomates (not quite coelomates) possess a fluid filled cavity between the mesoderm and endoderm. The three layers of the body cavity (ectoderm, endoderm, and mesoderm) are not clearly distinguished. The fluid filled cavity functions as a skeleton, somewhat supporting the body shape.
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- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals I”
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2.4.2 Nematoda
- Reading: University of California, Berkeley’s Museum of Paleontology: “Introduction to the Nematoda”
Link: University of California, Berkeley’s Museum of Paleontology: “Introduction to Nematoda” (HTML)
Instructions: Read the entire webpage for characteristics of nematodes, or roundworms. Remember that nematodes are sometimes classified by biologists as pseudocoelomates.
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- Reading: Earth Life: Gordon Ramel’s “The Phylum Nematoda”
Link: Earth Life: Gordon Ramel’s “The Phylum Nematoda” (HTML)
Instructions: Read the entire webpage for supplemental information on the characteristics, anatomy, and ecology of nematodes, as well as a list of classifications.
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- Reading: University of California, Berkeley’s Museum of Paleontology: “Introduction to the Nematoda”
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2.5 Coelomates: Protostomes
- Reading: University of New Mexico’s Biology Undergraduate Labs: “Protostomes”
Link: University of New Mexico’s Biology Undergraduate Labs: “Protostomes” (HTML)
Instructions: Read the entire lab on protostomes, paying close attention to any diagrams and images. Protostomes are a group of animals in which the mouth develops first. Protostomes also possess a true body cavity–the coelom. molluscs, annelids, and arthropods fall under this category.
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- Reading: University of New Mexico’s Biology Undergraduate Labs: “Protostomes”
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2.5.1 Annelida
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals II”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals II” (HTML)
Instructions: Read the sections “Coelomates,” “Phylum Annelida,” “Phylum Mollusca,” “Phylum Arthropoda,” and “Deuterostomes and Protostomes.” This reading touches on the topics outlined in subunits 2.4.3-2.4.5.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Interactive Lab: Rutgers University: “Phylum Annelida” Lab
Rutgers University: “Phylum Annelida” Lab
Instructions: Read the text on the left side of the webpage, and click on the following links to view an image on the right side of the screen: Class Polychaeta, Class Oligocheta, and Class Hirudinea. Read until the beginning of the Mollusca chapter.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals II”
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2.5.2 Mollusca
- Reading: University of California, Berkeley’s Museum of Paleontology’s version of Paul Bunje’s “The Mollusca”
Link: University of California, Berkeley’s Museum of Paleontology’s version of Paul Bunje’s “The Mollusca” (HTML)
Instructions: Read the entire webpage, and carefully examine all images.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: Allegany County Public Schools: Jason Huber and Melissa Blank’s “Phylum Mollusca”
Link: Allegany County Public Schools: Jason Huber and Melissa Blank’s “Phylum Mollusca” (HTML)
Instructions: Review the information on characteristics and classifications of mollusks.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: University of California, Berkeley’s Museum of Paleontology’s version of Paul Bunje’s “The Mollusca”
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2.5.3 Arthropoda
- Reading: Peripatus: “Arthropoda”
Link: Perpipatus: “Arthropoda” (HTML)
Instructions: Read the entire webpage about the origins and evolution of Arthropoda.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: Peripatus: “Arthropoda”
- 2.6 Coelomates: Deuterostomes
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2.6.1 Echinodermata
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals III”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals III” (HTML)
Instructions: Read the sections “Phylum Echinodermata,” “Phylum Hemichordata,” “Phylum Chordata,” “Subphylum Urochordata,” “Subphylum Cephalochordata,” and “Subphylum Vertebrata” (through “Classification of the Vertebrates”). This reading coves the topics outlined in subunits 2.5.1-2.5.3. Deuterostomes are distinguished from protostomes by the fact that the first opening of the body cavity–the blastopore–becomes the anus. The mouth develops opposite to the blastopore, or the anus. The digestive tract then develops connecting the mouth and anus. The coelom of these organisms also develops internally. Echinodermata, Hemichordata, and Chordata belong to Deuterostomes. You will learn about each of these more in-depth in subunits 2.6.1-2.6.3.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals III”
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2.6.2 Hemichordata
- Reading: Earth Life: Gordon Ramsel’s “The Phylum Hemichordata”
Link: Earth Life: Gordon Ramsel’s “The Phylum Hemichordata” (HTML)
Instructions: Read the entire webpage for information on the two classes of the Phylum Hemichordata, or Acorn Worms.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Encyclopedia of Life: Leo Shapiro’s “Hemichordata"
Link: Encyclopedia of Life: Leo Shapiro’s “Hemichordata” (HTML)
Instructions: Examine the image at the top of the page, and read the entire encyclopedic article for an overview of Hemichordata.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Earth Life: Gordon Ramsel’s “The Phylum Hemichordata”
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2.6.3 Chordata
- Reading: Bumblebee.org: “Chordata”
Link: Bumblebee.org: “Chordata” (HTML)
Instructions: Read the entire webpage. Note that this reading also covers the topics of Chordata subphylums outlined in sections 2.6.3.1 and 2.6.3.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Bumblebee.org: “Chordata”
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2.6.3.1 Urochordata
Note: This topic is covered by the reading beneath subunit 2.6.3.
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2.6.3.2 Cephalochordata
Note: This topic is covered by the reading beneath subunit 2.6.3.
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2.6.3.3 Craniata
- Reading: The Tree of Life Project: Philippe Janvier’s “Craniata”
Link: The Tree of Life Project: Philippe Janvier’s “Craniata” (HTML)
Instructions: Read this page in its entirety for an introduction to the craniates group. Do not concern yourself with details of physiological characteristics or phylogenetic relationships. Order Craniata (the vertebrates) consists of all animals that have a skull encasing a brain. These animals have central nervous systems, brains, spinal cords, and endoskeletons. We will study this order, because you are likely to encounter its members (birds, snakes, squirrels, fish—and humans) in your day-to-day life.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: The Tree of Life Project: Philippe Janvier’s “Craniata”
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2.6.4 Chondrichthyes
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals III”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals III” (HTML)
Instructions: Read from the section “Class Chondricthyes” to the end of the chapter. This reading also covers the topic outlined in subunit 2.6.5.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Biological Diversity: Animals III”
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2.6.5 Tetrapoda
- Reading: University of Maryland: J. Merck’s “Tetrapoda”
Link: University of Maryland: J. Merck’s “Tetrapoda” (HTML)
Instructions: Read the entire webpage. This covers the topics 2.6.5.1-2.6.5.4
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: University of Maryland: J. Merck’s “Tetrapoda”
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2.6.5.1 Amphibia
Note: This topic is covered by the reading below subunit 2.6.5.
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2.6.5.2 Reptilia
Note: This topic is covered by the reading below subunit 2.6.5.
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2.6.5.3 Aves

Note: This topic is covered by the reading below subunit 2.6.5.
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2.6.5.4 Mammalia

Note: This topic is covered by the reading below subunit 2.6.5.
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Unit 2 Assessment
- Assessment: The Saylor Foundation’s “Unit 2 Quiz”
Link: The Saylor Foundation’s “Unit 2 Quiz” (PDF)
Instructions: Download the quiz linked above, and answer each question before checking your answers against The Saylor Foundation’s “Unit 2 Quiz Answer Key” (PDF).See a broken link? Please let us know!
- Assessment: The Saylor Foundation’s “Unit 2 Quiz”
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Unit 3: Comparative and Anatomy and Physiology
This unit will introduce you to the basics of animal anatomy and physiology. The unit will focus primarily on those characteristics and systems that are shared among animal groups but will also provide you with an overview of some of the physiological differences among animal groups and the evolutionary pressures that led to those differences.
Unit 3 Time Advisory show close
Unit 3 Learning Outcomes show close
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3.1 Skeletal Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Muscular and Skeletal Systems”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Muscular and Skeletal Systems” (HTML)
Instructions: Read from the beginning of this page through the section on “Joints.” This reading covers the topics outlined in subunits 3.1.1 and 3.1.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Web Media: State University of New York: Dr. Michael Darby’s “Exoskeletons vs. Endoskeletons”
Link: State University of New York: Dr. Michael Darby’s “Exoskeletons vs. Endoskeletons” (HTML)
Instructions: Read this table comparing the characteristics and constraints of exoskeletons and endoskeletons, along with the brief descriptive paragraph above it. This resource covers the topics listed in subunits 3.1.1 and 3.1.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Muscular and Skeletal Systems”
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3.1.1 Exoskeleton
- Reading: North Carolina State University: Professor John R. Meyer’s “The Exoskeleton”
Link: North Carolina State University: Professor John R. Meyer’s “The Exoskeleton” (HTML)
Instructions: Read the first page of this introduction to the exoskeleton in its entirety.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: North Carolina State University: Professor John R. Meyer’s “The Exoskeleton”
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3.1.2 Endoskeleton
- Reading: National Center for Biotechnology Information’s PubMed: The Journal of Anatomy: W.B. Primrose’s “The Evolution of Vertebrate Endoskeleton"
Link: National Center for Biotechnology Information’s PubMed: The Journal of Anatomy: W.B. Primrose’s “The Evolution of Vertebrate Endoskeleton” (PDF)
Instructions: Read the entire paper from pages 1 to 19.
Terms of use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: National Center for Biotechnology Information’s PubMed: The Journal of Anatomy: W.B. Primrose’s “The Evolution of Vertebrate Endoskeleton"
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3.2 Nervous Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Nervous System”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Nervous System” (HTML)
Instructions: Read the first seven sections of this page (through “The Central Nervous System”). This reading also covers the topics in subunits 3.2.1 and 3.2.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: National Center for Biotechnology Information: A. Hay-Schmidt’s “The Evolution of the Serotonergic Nervous System”
Link: National Center for Biotechnology Information: A. Hay-Schmidt’s “The Evolution of the Serotonergic Nervous System” (PDF)
Instructions: On the webpage linked above, click on the “PDF” link at the top right-hand corner of the page after “Format.” Read the entire article (9 pages). This reading also covers the topics in subunits 3.2.1 and 3.2.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpages above.See a broken link? Please let us know!
- Reading: National Center for Biotechnology Information: A. Hay-Schmidt’s “The Evolution of the Serotonergic Nervous System”
Link: National Center for Biotechnology Information: A. Hay-Schmidt’s “The Evolution of the Serotonergic Nervous System” (PDF)
Instructions: On the webpage linked above, click on the “PDF” link at the top right-hand corner of the page after “Format.” Read the entire article (9 pages). This reading also covers the topics in subunits 3.2.1 and 3.2.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpages above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Nervous System”
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3.2.1 Non-Chordates
Note: This topic is covered by the reading in subunit 3.2.
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3.2.2 Chordates
Note: This topic is covered by the reading in subunit 3.2.
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3.3 Sensory Systems
- Reading: Clinton Community College: Dr. Michael Gregory’s Biology Web: “Sensory Systems”
Link: Clinton Community College: Dr. Michael Gregory’s Biology Web: “Sensory Systems” (HTML)
Instructions: Read this page in its entirety. Note that this reading covers the topics outlined in subunits 3.3.1-3.3.4.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Clinton Community College: Dr. Michael Gregory’s Biology Web: “Sensory Systems”
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3.3.1 Vibrations
- Reading: Washington University’s Biology of Fishes Course: Malcolm Smale et al’s “Otolith Atlas of Southern African Marine Fishes”Link: Washington University’s Biology of Fishes Course: Malcolm Smale et al’s “Otolith Atlas of Southern African Marine Fishes” (PDF)
Instructions: Read the entire post.
Terms of use: Please respect the copyright and terms of use displayed of the webpage above.See a broken link? Please let us know!
- Reading: Washington University’s Biology of Fishes Course: Malcolm Smale et al’s “Otolith Atlas of Southern African Marine Fishes”
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3.3.2 Electroreceptors
- Reading: Dr. John Kimball’s Biology Pages: “Electric Organs and Electroreceptors”
Link: Dr. John Kimball’s Biology Pages: “Electric Organs and Electroreceptors” (HTML)
Instructions: Read this page in its entirety.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Electric Organs and Electroreceptors”
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3.3.3 Visual Systems
- Reading: University of Nebraska’s Medical Center: Dr. Michael D. Mann’s The Nervous System in Action: “Chapter 7: Vision”
Link: University of Nebraska’s Medical Center: Dr. Michael D. Mann’s The Nervous System in Action: “Chapter 7: Vision” (HTML or PDF)
Instructions: Scroll down to Chapter 7, and select the “Vision” hyperlink or the option to download the chapter as a PDF. Read this chapter in its entirety for information on the biological structure, physiology, and function of the vision system (32 pages). Make sure to carefully view the figures and visuals provided.
Terms of use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: University of Nebraska’s Medical Center: Dr. Michael D. Mann’s The Nervous System in Action: “Chapter 7: Vision”
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3.3.4 Sensing Chemicals
- Reading: University of Nebraska’s Medical Center: Dr. Michael D. Mann’s The Nervous System in Action: “Chapter 10: Gustatory and Olfactory Senses
Link: University of Nebraska’s Medical Center: Dr. Michael D. Mann’s The Nervous System in Action: “Chapter 10: Gustatory and Olfactory Senses” (HTML or PDF)
Instructions: Scroll down to Chapter 10, and select the “Gustatory and Olfactory Senses” hyperlink or the option to download the chapter as a PDF. Read Chapter 10 in its entirety (11 pages) to learn about gustatory and olfactory senses.
Terms of use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: University of Nebraska’s Medical Center: Dr. Michael D. Mann’s The Nervous System in Action: “Chapter 10: Gustatory and Olfactory Senses
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3.3.4.1 Smell

Note: This topic is covered by the reading below subunit 3.3.4.
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3.3.4.2 Taste
Note: This topic is covered by the reading below subunit 3.3.4.
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3.3.4.3 Pheromone Detection
- Reading: Dr. John Kimball’s Biology Pages: “Pheromones”
Link: Dr. John Kimball’s Biology Pages: “Pheromones” (HTML)
Instructions: Read this page in its entirety. Note that while only insects and mammals are described, virtually all animals use and recognize pheromones and many organisms that live in areas with little or no light depend upon them.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Pheromones”
- 3.4 Respiratory Systems
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3.4.1 Aquatic
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Respiratory Systems”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Respiratory Systems” (HTML)
Instructions: Read the sections on “Respiratory Surfaces” and “Methods of Respiration.” These will cover the topics in sections 3.4.1.1 and 3.4.1.2.
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- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Respiratory Systems”
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3.4.1.1 Diffusion
Note: This topic is covered by the reading beneath subunit 3.4.1.
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3.4.1.2 Gills
Note: This topic is covered by the reading beneath subunit 3.4.1.
- 3.4.2 Terrestrial
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3.4.2.1 Arthropods
- Reading: Dr. John Kimball’s Biology Pages: “Tracheal Breathing”
Link: Dr. John Kimball’s Biology Pages: “Tracheal Breathing” (HTML)
Instructions: Read this page in its entirety.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Tracheal Breathing”
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3.4.2.2 Vertebrates
- Reading: Dr. John Kimball’s Biology Pages: “Vertebrate Lungs”
Link: Dr. John Kimball’s Biology Pages: “Vertebrate Lungs” (HTML)
Instructions: Read this page in its entirety and follow the link to “The Human Respiratory System”; here, read all sections except “Diseases of the Lungs.”
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Vertebrate Lungs”
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3.5 Circulatory Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Circulatory Systems”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Circulatory Systems” (HTML)
Instructions: Read from the beginning of this page through the section on “Vertebrate Vascular Systems.”
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Lecture: Clinton Community College (SUNY): Michael Gregory’s “Circulatory System”
Link: Clinton Community College (SUNY): Michael Gregory’s “Circulatory System” (HTML)
Instructions: Review the lecture notes for a concise overview of the circulatory system.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Circulatory Systems”
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3.5.1 Open
- Reading: Dr. John Kimball’s Biology Pages: “An ‘Open’ Circulatory System: The Grasshopper”
Link: Dr. John Kimball’s Biology Pages: “An ‘Open’ Circulatory System: The Grasshopper” (HTML)
Instructions: Read this entire webpage for an example of an arthropod with an open circulatory system.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “An ‘Open’ Circulatory System: The Grasshopper”
- 3.5.2 Closed
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3.5.2.1 Earthworms
Note: This topic is covered by the reading below section 3.5.2.2.
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3.5.2.2 Vertebrates
- Reading: Dr. John Kimball’s Biology Pages: “Animal Circulatory Systems”
Link: Dr. John Kimball’s Biology Pages: “Animal Circulatory Systems” (HTML)
Instructions: Read this page in its entirety. This reading covers the topics outlined in subunits 3.5.2.1 and 3.5.2.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Web Media: The Howard Hughes Medical Institute’s “The Vertebrate Circulatorium”
Link: The Howard Hughes Medical Institute’s “The Vertebrate Circulatorium” (HTML, Adobe Flash)
Instructions: Scroll down to almost the end of the list of interactive exercises and click on “The Vertebrate Circulatorium.” Then click on the different animal examples and observe their circulation patterns in both a systematic view and a heart-detail view.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Animal Circulatory Systems”
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3.6 Immune Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Lymphatic and Immune Systems” and Science Daily’s “Invertebrate Immune Systems are Anything but Simple”
Links: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Lymphatic and Immune Systems” (HTML) and Science Daily’s “Invertebrate Immune Systems are Anything but Simple” (HTML)
Instructions: In “The Lymphatic and Immune Systems,” read the subsections “Immunity,” “General Defenses,” and “Specific Defenses” (up to but not including “Lymphocytes”). Although the focus is on human immunity, the reading will provide you with an overall introduction to the topic. You should also read the entirety of the Science Daily article to get a sense of how non-vertebrate species deal with infections. The immune system is the body’s “defense mechanism.” The components of the immune system include cells and organs that protect the body from invasive bacteria and viruses. Adaptive and innate immunity are the two components of the immune system.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Lymphatic and Immune Systems” and Science Daily’s “Invertebrate Immune Systems are Anything but Simple”
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3.6.1 Innate Immune System
- Reading: University of South Carolina’s School of Medicine: Gene Mayer’s “Innate (Non-Specific) Immunity”
Link: University of South Carolina’s School of Medicine: Gene Mayer’s “Innate (Non-Specific) Immunity” (HTML)
Instructions: Read the entire chapter on innate immunity.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: University of South Carolina’s School of Medicine: Gene Mayer’s “Innate (Non-Specific) Immunity”
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3.6.2 Adaptive Immune System
- Reading: National Center for Biotechnology Information’s Bookshelf: Alberts et al.’s Molecular Biology of the Cell, 4th edition: “Chapter 24: The Adaptive Immune System”
Link: National Center for Biotechnology Information’s Bookshelf: Alberts et al.’s Molecular Biology of the Cell, 4th edition: “Chapter 24: The Adaptive Immune System” (HTML)
Instructions: Read the entire chapter on the webpage linked above.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: National Center for Biotechnology Information’s Bookshelf: Alberts et al.’s Molecular Biology of the Cell, 4th edition: “Chapter 24: The Adaptive Immune System”
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3.7 Endocrine Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Endocrine Systems”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Endocrine Systems” (HTML)
Instructions: Read this page in its entirety; it will provide you with an overview of endocrine systems and mechanisms. The endocrine system produces hormones that control and regulate body functions. The hormones are responsible for growth, development, digestion and reproduction in a living system. In this section, you will be reading about the invertebrate and vertebrate endocrine systems. Note that this reading also covers the topics outlined in subunits 3.7.1 and 3.7.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Endocrine Systems”
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3.7.1 Invertebrate
- Reading: The Society of Endocrinology’s Journal of Endocrinology: Volk Hartenstein’s “The Neuroendocrine System of Invertebrates: A Developmental and Evolutionary Perspective”
Link: The Society of Endocrinology’s Journal of Endocrinology: Volk Hartenstein’s “The Neuroendocrine System of Invertebrates: A Developmental and Evolutionary Perspective” (HTML or PDF)
Link: Read this entire article (16 pages). You may also choose to download the PDF of this article by clicking on “Full Text PDF” on the right side of the webpage.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: The Society of Endocrinology’s Journal of Endocrinology: Volk Hartenstein’s “The Neuroendocrine System of Invertebrates: A Developmental and Evolutionary Perspective”
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3.7.2 Vertebrate
Note: This topic is covered by the reading below subunit 3.7.
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3.8 Digestive Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Digestive Systems”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Digestive Systems” (HTML)
Instructions: Read from the beginning of this page through the section “Stages in the Digestive Process.”
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- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Digestive Systems”
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3.8.1 Herbivore
- Reading: The Saylor Foundation’s “Comparison of Digestive Systems”
Link: The Saylor Foundation’s “Comparison of Digestive Systems”
Instructions: Click on the link above, and read the entire text to learn about the digestive systems of herbivores, carnivores, and omnivores. This reading should take approximately 15 minutes to complete.See a broken link? Please let us know!
- Reading: The Saylor Foundation’s “Comparison of Digestive Systems”
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3.8.2 Carnivore
Note: This topic is covered in the reading beneath subunit 3.8.1. Remember that the term carnivore to animals who diet primarily on meat.
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3.8.3 Omnivore
- Web Media: YouTube: Bozemanbiology's “Digestive System”
Link: YouTube: Bozemanbiology's “Digestive System” (YouTube)
Instructions: Watch the video for an overview of the human digestive system. Remember that the term omnivore refers to animals that diet on both plants and meat.
Watching this video should take approximately 10 minutes.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Web Media: YouTube: Bozemanbiology's “Digestive System”
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3.9 Excretory Systems
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Excretory System”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Excretory System” (HTML)
Instructions: Read from the beginning of this page through the section “Vertebrates Have Paired Kidneys” as well as the section “Kidney Function.” This resource covers the topics outlined in subunits 3.9.1 and 3.9.2. The excretory system functions to remove toxic metabolic waste from the organism’s system to maintain homeostasis (equilibrium). Kidneys and skin eliminate urine and sweat as waste products. In this section, you will be reading about vertebrate and invertebrate excretory systems.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Lecture: Clinton Community College (SUNY): Michael Gregory’s “Excretory System”
Link: Clinton Community College (SUNY): Michael Gregory’s “Excretory System” (HTML)
Instructions: Read this entire webpage of lecture notes on the excretory system.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “The Excretory System”
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3.9.1 Invertebrate
- Reading: Ex-anatomy.org: University of California, Riverside: Neil A. Campbell’s Excretory System, 2nd edition: “Invertebrates”
Link: Ex-anatomy.org: University of California, Riverside: Neil A. Campbell’s Excretory System, 2nd edition: “Invertebrates” (HTML)
Instructions: Read the brief information on metanephridia of earthworms.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Ex-anatomy.org: University of California, Riverside: Neil A. Campbell’s Excretory System, 2nd edition: “Invertebrates”
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3.9.2 Vertebrate
Note: This topic is covered by the reading beneath subunit 3.9.
- 3.10 Reproductive Systems
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3.10.1 Asexual Reproduction
- Reading: Dr. John Kimball’s Biology Pages: “Asexual Reproduction in Animals”
Link: Dr. John Kimball’s Biology Pages: “Asexual Reproduction in Animals” (HTML)
Instructions: Read “Budding,” “Fragmentation,” and “Parthenogenesis,” and read the first sub-section of “Why Choose Asexual Reproduction?” (up to but not including “Purging Harmful Mutations”). This will cover the material in 3.10.1.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Asexual Reproduction in Animals”
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3.10.1.1 Binary Fission in Protozoa
- Reading: Cornell University: The Department of Microbiology’s “Binary Fission and Other Forms of Reproduction in Bacteria”
Link: Cornell University: Department of Microbiology’s “Binary Fission and Other Forms of Reproduction in Bacteria” (HTML)
Instructions: Read the entire 3-page paper linked on the Cornell University website. Make sure to click on the “page 2” and “page 3” links at the bottom of the webpage to continue reading.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Cornell University: The Department of Microbiology’s “Binary Fission and Other Forms of Reproduction in Bacteria”
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3.10.1.2 Parthenogenesis
- Reading: John Kimball’s Biology Pages “Parthenogenesis”
Link: John Kimball’s Biology Pages “Parthenogenesis” (HTML)
Instructions: Read the entire page.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: John Kimball’s Biology Pages “Parthenogenesis”
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3.10.2 Sexual Reproduction
- Reading: Marietta College: Dr. Dave McShaffrey’s “Reproduction in Vertebrates”
Link: Marietta College: Dr. Dave McShaffrey’s “Reproduction in Vertebrates” (HTML)
Instructions: Read this page in its entirety. It will cover the topics outlined in sections 3.10.2-3.10.5.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Marietta College: Dr. Dave McShaffrey’s “Reproduction in Vertebrates”
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3.10.3 Simultaneous Hermaphroditism

Note: This topic is covered by the reading below subunit 3.10.2.
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3.10.4 Sequential Hermaphroditism
Note: This topic is covered by the reading below subunit 3.10.2.
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3.10.5 Gonochorism/Dioecious Reproduction (Two Separate Sexes)
Note: This topic is covered by the reading below subunit 3.10.2.
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3.10.6 Female Reproductive System
- Reading: Clinton Community College: Dr. Michael Gregory’s Biology Web: “Animal Reproduction”
Link: Clinton Community College: Dr. Michael Gregory’s Biology Web: “Animal Reproduction” (HTML)
Instructions: Read from the subsection “Reproductive Cycles” through the end of the page. Do not concern yourself with the diagrams of hormones and hormone cascades. This resource will also cover the topic outlined in subunit 3.10.7.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Clinton Community College: Dr. Michael Gregory’s Biology Web: “Animal Reproduction”
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3.10.7 Male Reproductive System
- Reading: The Cleveland Clinic Foundation: “The Male Reproductive System”Link: The Cleveland Clinic Foundation: “The Male Reproductive System” (HTML)
Instructions: Read the entire webpage for information on the human male reproductive system.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Virginia Tech: Dr. Thomas Caceci’s Veterinary Histology: “Exercise 27: Male Reproductive System”
Link: Virginia Tech: Dr. Thomas Caceci’s Veterinary Histology: “Exercise 27: Male Reproductive System” (HTML)
Instructions: Read the entire lab on the male reproductive system.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: The Cleveland Clinic Foundation: “The Male Reproductive System”
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3.11 Terrestrial vs. Aquatic Physiology
- Reading: Coastal Carolina University: Professor Sharon Gilman’s “Food Webs and Challenges of the Marine Environment”
Link: Coastal Carolina University: Professor Sharon Gilman’s “Food Webs and Challenges of the Marine Environment” (HTML)
Instructions: Read the section entitled “The Marine Environment.” However, please note that the information in the “Density Problems” section on fish swim bladders is not accurate; fish do not inflate or deflate swim bladders as a means of rising or sinking in the water.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Coastal Carolina University: Professor Sharon Gilman’s “Food Webs and Challenges of the Marine Environment”
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3.11.1 Hydration
- Reading: Texas A&M: Professor Jon Baskin’s “Tetrapod Origins”
Link: Texas A&M: Professor Jon Baskin’s “Tetrapod Origins” (HTML)
Instructions: Read from the beginning of this page up to but not including the section “Class Amphibia.” Note that this reading covers the topics outlined in subunit 3.11.1-3.11.3.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Texas A&M: Professor Jon Baskin’s “Tetrapod Origins”
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3.11.2 Movement

Note: This topic is covered in the locomotion section of the reading in subunit 3.11.1.
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3.11.3 Reproduction

Note: This topic is briefly covered in the reproduction section of the reading in subunit 3.11.1. Remember from your reading on amniotes that, due to the evolution of the hard-shelled amniotic egg, reptiles, birds, and mammals no longer need to lay their eggs in water; also note that fertilization in all amniotes is internal.
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Unit 3 Assessment
- Assessment: Assessment: The Saylor Foundation’s “Unit 3 Quiz”
Link: The Saylor Foundation’s “Unit 3 Quiz” (PDF)
Instructions: Download the quiz linked above, and answer each question before checking your answers against The Saylor Foundation’s “Unit 3 Quiz Answer Key” (PDF).See a broken link? Please let us know!
- Assessment: Assessment: The Saylor Foundation’s “Unit 3 Quiz”
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Unit 4: Animal Ecology
In this final unit, we will learn how animals fit into the global ecology. Remember that ecology is the biological study of organisms’ interactions with their environments. The abundance and distribution of animals depends on abiotic factors, such as climate and habitat, as well as biotic factors, such as species’ interactions with other organisms. In this unit you will learn about the factors affecting global animal distributions, the interrelationships among organisms within communities, and the relationship of animals to energy and carbon cycles.
Unit 4 Time Advisory show close
Unit 4 Learning Outcomes show close
- 4.1 Global Ecology
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4.1.1. Animal Dispersion around the World
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Community and Ecosystem Dynamics”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Community and Ecosystem Dynamics” (HTML)
Instructions: Read from “Classification of Communities” up to but not including the section “Changes in Communities over Time.”
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Blue Planet Biomes: “World Biomes”
Link: Blue Planet Biomes: “World Biomes” (HTML)
Instructions: Read the entire webpage. Also, explore the map, and read more information about each different type of biome by clicking on the names of each biome (i.e. Tundra, Taiga, Grasslands, etc.) in the map’s key. This resource covers the topics outlined in subunits 4.1.1.1-4.1.1.6.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage aboveSee a broken link? Please let us know!
- Reading: University of California, Berkeley’s Museum of Paleontology: “The World’s Biomes”
Link: University of California, Berkeley’s Museum of Paleontology: “The World’s Biomes” (HTML)
Instructions: Read the entire webpage, and click on the image for each biome to read more. Pay particular attention to the “Freshwater” and “Marine” sections. The “Desert,” “Forest,” “Grassland,” and “Tundra” sections will reinforce what you have learned in the Blue Planet Biome readings. This resource will cover the topics in subunits 4.1.1.1 - 4.1.1.7.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Community and Ecosystem Dynamics”
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4.1.1.1. Rainforest
Note: This topic is covered by the readings in subunit 4.1.1
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4.1.1.2. Deciduous Forest
Note: This topic is covered by the readings in subunit 4.1.1.
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4.1.1.3. Grassland
Note: This topic is covered by the readings in subunit 4.1.1.
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4.1.1.4. Coniferous Forest
Note: This topic is covered by the readings in subunit 4.1.1.
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4.1.1.5. Tundra
Note: This topic is covered by the readings in subunit 4.1.1.
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4.1.1.6. Desert
Note: This topic is covered by the readings in subunit 4.1.1.
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4.1.1.7. Marine and Freshwater
Note: This topic is covered by the readings in subunit 4.1.1.
- 4.1.2 Animal Abundance and Distribution
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4.1.2.1 Carrying Capacity
- Reading: Dr. John Kimball’s Biology Pages: “Checks on Population Growth”
Link: Dr. John Kimball’s Biology Pages: “Checks on Population Growth” (HTML)
Instructions: Read from “The Carrying Capacity of the Environment” to the end of the webpage. This will cover the material in 4.1.2.1 - 4.1.2.2.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Checks on Population Growth”
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4.1.2.2 K- and r-Selected Species
Note: This topic is covered by the reading beneath subunit 4.1.2.1.
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4.1.2.3 Factors that Affect Migration
- Reading: National Parks Service: “Migration Basics”
Link: National Parks Service: “Migration Basics” (HTML)
Instructions: Read this page in its entirety.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: National Parks Service: “Migration Basics”
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4.1.2.4 Invasion of New Habitat
- Reading: The Nature Conservancy’s “The Threat of Invasive Species” and The Habitable Planet’s “Invasion by Exotic Species”
Link: The Nature Conservancy’s “The Threat of Invasive Species” (HTML) and The Habitable Planet’s “Invasion by Exotic Species” (HTML)
Instructions: Read these pages in their entirety to learn about how species become invasive and what impact they have on native environments and species.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: The Nature Conservancy’s “The Threat of Invasive Species” and The Habitable Planet’s “Invasion by Exotic Species”
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4.2 Animal Communities
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Population Ecology”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Population Ecology” (HTML)
Instructions: Scroll down to the section titled “Several Basic Controls Govern Population Size”; read from this section up to but not including “Population Decline and Extinction.” This reading will cover the topics outlined in subunits 4.2.1 - 4.2.5.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Lecture: YouTube: Yale University: Professor Stephen C. Stearns’ “Ecological Communities,” from Principles of Evolution, Ecology and Behavior
Link: YouTube: Yale University: Professor Stephen C. Stearns’ “Ecological Communities,” (YouTube)
Also available in: Flash, Quicktime, Transcript, MP3
Instructions: Watch Lecture 28 “Ecological Communities”. Note that the terms “trophic cascades” and “trophic levels” refer to food webs and food chains. This reading will cover the topics outlined in subunits 4.2.1-4.2.5.
Watching this video should take approximately 1 hour.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Interactive Lab: The Habitable Planet’s “Ecology Lab”
Link: The Habitable Planet’s “Ecology Lab” (HTML and Adobe Flash)
Instructions: Click on the instructions for the first activity, “The Producers,” to understand the premise of the model. Read all steps, then click to open the simulator and run the model. This interactive lab will allow you to visualize the community interrelationships of niche partitioning and competition and see how these relationships are affected by predators (in this case, the introduction of an herbivore to the two-plant community).
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Population Ecology”
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4.2.1 Competition
Note: This topic is covered in the reading beneath subunit 4.2.
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4.2.2 Predation

Note: This topic is covered in the reading beneath subunit 4.2.
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4.2.3 Symbiosis

Note: This topic is covered in the reading beneath subunit 4.2.
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4.2.4 Niche Partitioning

Note: This topic is covered in the reading beneath subunit 4.2.
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4.2.4.1 Specialization
Note: This topic is covered in the reading beneath subunit 4.2.
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4.2.4.2 Generalization
Note: This topic is covered in the reading beneath subunit 4.2.
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4.3 Speciation
- Reading: University of Michigan’s Global Change Course: “The Process of Speciation”
Link: University of Michigan’s Global Change Course: “The Process of Speciation” (HTML)
Instructions: Scroll down to “What is a Species?” and read from this section to the end of the webpage. This reading will cover topics outlined in subunits 4.3.1-4.3.4.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: University of Michigan’s Global Change Course: “The Process of Speciation”
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4.3.1 Prezygotic Isolation Mechanisms
Note: This topic is covered in the reading beneath subunit 4.3.
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4.3.2 Postzygotic Isolation Mechanisms

Note: This topic is covered in the reading beneath subunit 4.3.
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4.3.3 Allopatric Speciation
- Reading: Dr. John Kimball’s Biology Pages: “Speciation”
Link: Dr. John Kimball’s Biology Pages: “Speciation” (HTML)
Instructions: Read this entire webpage. This reading will cover topics in both subunits 4.3.3 and 4.3.4.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “Speciation”
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4.3.4 Sympatric Speciation

Note: This topic is covered in the reading beneath subunit 4.3.3.
- 4.4 Resource Cycling
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4.4.1 Energy Cycle
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Community and Ecosystem Dynamics”
Link: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Community and Ecosystem Dynamics” (HTML)
Instructions: Read the section “Ecosystems and Communities” in its entirety. Resource cycling is important to maintain sustainability of the biosphere. The trophic levels, biogeochemical cycles play a crucial role in resource cycling.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Interactive Lab: The Habitable Planet’s “Ecology Lab”
Link: The Habitable Planet’s “Ecology Lab” (HTML and Adobe Flash)
Instructions: Click on the instructions for the second activity, “Food Web,” to understand the premise of the model. Read all steps, then click to open the simulator and run the model. This interactive lab will allow you to visualize the community dynamics of animals at different trophic levels in a food web.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Estrella Mountain Community College: Dr. Michael Farabee’s The Online Biology Book: “Community and Ecosystem Dynamics”
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4.4.2 Carbon Cycle
- Reading: Dr. John Kimball’s Biology Pages: “The Carbon Cycle”
Link: Dr. John Kimball’s Biology Pages: “The Carbon Cycle” (HTML)
Instructions: Read this page in its entirety.
Terms of Use: Please respect the copyright and terms of use displayed on the webpage above.See a broken link? Please let us know!
- Reading: Dr. John Kimball’s Biology Pages: “The Carbon Cycle”
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Unit 4 Assessment
- Assessment: Assessment: The Saylor Foundation’s “Unit 4 Quiz”
Link: The Saylor Foundation’s “Unit 4 Quiz” (PDF)
Instructions: Download the quiz linked above, and answer each question before checking your answers against the Saylor Foundation’s “Unit 4 Quiz Answer Key” (PDF)See a broken link? Please let us know!
- Assessment: Assessment: The Saylor Foundation’s “Unit 4 Quiz”
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Final Exam
- Final Exam: The Saylor Foundation’s “BIO309 Final Exam”
Link: The Saylor Foundation’s “BIO309 Final Exam”
Instructions: You must be logged into your Saylor Foundation School account in order to access this exam. If you do not yet have an account, you will be able to create one, free of charge, after clicking the link.See a broken link? Please let us know!
- Final Exam: The Saylor Foundation’s “BIO309 Final Exam”
Questions? Consult the FAQ's!


